PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008225724.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 302aa    MW: 34771.4 Da    PI: 8.9099
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008225724.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.84.6e-49191481128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     l pG+rFhPtdeelv +yL++kve+k+++l e ik +diyk++PwdLpk +   + kewyfF++r kky+++ r+nr+tksg+Wkatg dk+v+s
  XP_008225724.1  19 LLPGYRFHPTDEELVRFYLRRKVENKPIRL-ELIKLIDIYKYDPWDLPKaSGIVGGKEWYFFCRRGKKYRNSVRPNRVTKSGFWKATGIDKPVYS 112
                     579***************************.89***************523334889************************************** PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_008225724.1 113 VgdFHSCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 148
                     8554556***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-555177IPR003441NAC domain
PROSITE profilePS5100553.57119178IPR003441NAC domain
PfamPF023655.1E-2621148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MEVQNMMSDS NNIKEDANLL PGYRFHPTDE ELVRFYLRRK VENKPIRLEL IKLIDIYKYD  60
PWDLPKASGI VGGKEWYFFC RRGKKYRNSV RPNRVTKSGF WKATGIDKPV YSVGDFHSCI  120
GLKKSLVYYR GSAGKGTKTD WMMHEFRLPA SSSKDDTSNI KNYTQEAEVW TLCRILKRDN  180
NYSCRKYASN WQKTTSNPKQ IVADSSSKPC SPESDISFGA LAANKDQFER SPILYNGHMY  240
EGNRFSAGDQ LSLKGEVDPM VNSYISFSNP KEDEMLTSDG NWDELRPMVD CVLNPSLLYS  300
CR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4671833173Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008225724.10.0PREDICTED: transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK551e-84NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLM5WLG30.0M5WLG3_PRUPE; Uncharacterized protein
STRINGVIT_12s0028g00860.t011e-109(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-86NAC domain containing protein 42